Survival-associated eQTLs across different cancer types
We identified 22,212 eQTLs associated with patient overall survival across different cancer types at FDR < 0.05.
|
Cancer type
|
SNP ID
|
SNP position (hg19)
|
Alleles (A/a)
|
log-rank test p-value
|
Sample size
|
Median survival time AA
|
Median survival time Aa
|
Median survival time aa
|
|
|---|---|---|---|---|---|---|---|---|---|
| KIRP | rs35225809 | chr11:8533585 | C/T | 0.000453 | 214 | 15.88 | 17.62 | 4.82 | KM Plot |
| KIRP | rs35243068 | chr6:28673434 | G/A | 4.09E-7 | 207 | 15.88 | 10.25 | 9.77 | KM Plot |
| KIRP | rs35244712 | chr14:74292444 | TAA/T | 0.000357 | 211 | 17 | 18 | 6.57 | KM Plot |
| KIRP | rs35276668 | chr4:76606893 | C/A | 8.0E-5 | 211 | 14.32 | 17.12 | 16.43 | KM Plot |
| KIRP | rs35304979 | chr6:26356347 | C/A | 3.08E-7 | 214 | 16.5 | 13.17 | 9.77 | KM Plot |
| KIRP | rs35307327 | chr6:26370474 | C/T | 3.08E-7 | 214 | 16.5 | 13.17 | 9.77 | KM Plot |
| KIRP | rs35337219 | chr6:27542282 | CT/C | 2.27E-7 | 213 | 16.45 | 12.8 | 9.77 | KM Plot |
| KIRP | rs35341418 | chr16:4529821 | C/A | 3.38E-6 | 214 | 16.45 | 12.63 | 10.83 | KM Plot |
| KIRP | rs35345226 | chr6:28091580 | A/G | 1.99E-7 | 213 | 16.43 | 16.43 | 9.77 | KM Plot |
| KIRP | rs35353359 | chr6:28324378 | C/T | 2.02E-7 | 213 | 16.47 | 13.6 | 9.77 | KM Plot |
| KIRP | rs35354172 | chr16:20439700 | C/G | 0.000356 | 213 | 15.88 | 16.72 | 1.73 | KM Plot |
| KIRP | rs35378979 | chr16:20446192 | C/T | 0.000387 | 212 | 16.45 | 13.6 | 1.73 | KM Plot |
| KIRP | rs35406427 | chr10:63396620 | C/T | 0 | 214 | 18.03 | 8.07 | 1.17 | KM Plot |
| KIRP | rs35436081 | chr6:25700342 | G/A | 5.55E-9 | 205 | 15.88 | 20.53 | 4.67 | KM Plot |
| KIRP | rs35437356 | chr1:212692029 | C/T | 1.37E-9 | 212 | 16.47 | 16.53 | 10.63 | KM Plot |